Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 AL596257.1-201ENST00000641463 2694 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 LINC00554-201ENST00000564841 3011 ntBASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHA3Q9Y5H8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 CROCCP1-201ENST00000426910 5675 ntBASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 PRELID1P1-202ENST00000567272 903 ntBASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 AP001350.2-201ENST00000625104 1094 ntBASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHA3Q9Y5H8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 HCG4-201ENST00000418983 998 ntBASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHA3Q9Y5H8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA3Q9Y5H8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA3Q9Y5H8 REXO1L8P-201ENST00000604378 1897 ntBASIC17.39■□□□□ 0.38
PCDHA3Q9Y5H8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHA3Q9Y5H8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHA3Q9Y5H8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms