Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDHGA11Q9Y5H2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGA11Q9Y5H2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 AC131009.4-201ENST00000624048 1740 ntBASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 AC079781.3-201ENST00000449110 356 ntBASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 MIR4492-201ENST00000581627 80 ntBASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA11Q9Y5H2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 AC132872.4-202ENST00000622924 2756 ntBASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 AL353732.1-201ENST00000569618 1459 ntBASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 AC017007.3-201ENST00000479865 435 ntBASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 KRT126P-201ENST00000549467 1181 ntBASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA11Q9Y5H2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AC005412.3-201ENST00000580309 715 ntBASIC16.18■□□□□ 0.18
PCDHGA11Q9Y5H2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms