Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 AC112191.1-201ENST00000523689 701 ntBASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA6Q9Y5G7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA6Q9Y5G7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 AL513480.1-201ENST00000451731 511 ntBASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 MIR3197-201ENST00000582241 73 ntBASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 LINC02199-201ENST00000506655 2702 ntBASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA6Q9Y5G7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 AC004461.1-201ENST00000412461 403 ntBASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 AC087163.2-201ENST00000457299 853 ntBASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms