Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 PKD1P5-201ENST00000532415 10291 ntBASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AP002414.1-201ENST00000391405 1147 ntBASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AC106730.1-201ENST00000566722 1090 ntBASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 MTDHP4-201ENST00000600287 670 ntBASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB3Q9Y5G1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 HLA-A-202ENST00000376806 1854 ntBASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 AL139424.1-201ENST00000607572 797 ntBASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 MIR7706-201ENST00000613747 67 ntBASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGB3Q9Y5G1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms