Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB11Q9Y5F2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHB11Q9Y5F2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHB11Q9Y5F2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 FAM185BP-201ENST00000443595 716 ntBASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 AL513480.1-201ENST00000451731 511 ntBASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 AC005412.3-201ENST00000580309 715 ntBASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 AL353732.1-201ENST00000569618 1459 ntBASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB11Q9Y5F2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 AC112191.1-201ENST00000523689 701 ntBASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 AC091167.2-201ENST00000579581 588 ntBASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 UBALD1-205ENST00000590891 2641 ntBASIC16.32■□□□□ 0.2
PCDHB11Q9Y5F2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 AC092474.2-201ENST00000424288 719 ntBASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms