Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 AC018470.1-201ENST00000624790 3129 ntBASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AL079307.3-201ENST00000556114 283 ntBASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AL844908.2-201ENST00000609461 460 ntBASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AC008738.7-201ENST00000609744 511 ntBASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHB7Q9Y5E2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 BANF1P1-201ENST00000553684 263 ntBASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 AL133215.2-201ENST00000609242 977 ntBASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHB7Q9Y5E2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms