Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RPH3AQ9Y2J0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 RHOQP3-201ENST00000437982 621 ntBASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 DUX4L17-201ENST00000557360 1267 ntBASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 TOP3BP1-201ENST00000420768 1380 ntBASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPH3AQ9Y2J0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 AC244107.1-201ENST00000442033 332 ntBASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 DNAJB3-202ENST00000449667 1266 ntBASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 KRT8P49-201ENST00000604166 1432 ntBASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 PCDHB17P-201ENST00000539533 2393 ntBASIC15.31■□□□□ 0.04
RPH3AQ9Y2J0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms