Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 LINC01144-201ENST00000626198 1710 ntBASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHA4Q9UN74 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 AL355306.1-201ENST00000415580 579 ntBASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 ADH5P3-201ENST00000433842 1137 ntBASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 KRT18P34-201ENST00000488218 1270 ntBASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 RARRES2P8-201ENST00000566335 367 ntBASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHA4Q9UN74 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 GPX1P2-201ENST00000429271 606 ntBASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 AL671277.1-201ENST00000429656 993 ntBASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 ACTG1P14-201ENST00000446382 1122 ntBASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 AC005829.1-201ENST00000570002 483 ntBASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHA4Q9UN74 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 RPSAP43-201ENST00000402237 625 ntBASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 AC112482.1-201ENST00000492080 688 ntBASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHA4Q9UN74 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms