Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ECHDC1Q9NTX5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 AL355306.1-201ENST00000415580 579 ntBASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 ADH5P3-201ENST00000433842 1137 ntBASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ECHDC1Q9NTX5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 KRT18P34-201ENST00000488218 1270 ntBASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 RARRES2P8-201ENST00000566335 367 ntBASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ECHDC1Q9NTX5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 GPX1P2-201ENST00000429271 606 ntBASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 AL671277.1-201ENST00000429656 993 ntBASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 ACTG1P14-201ENST00000446382 1122 ntBASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 AC079328.2-201ENST00000561241 3354 ntBASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ECHDC1Q9NTX5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ECHDC1Q9NTX5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms