Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 AC236430.1-201ENST00000402231 743 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 AC002472.2-201ENST00000442739 958 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 AC093724.1-201ENST00000448659 1027 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 RN7SL204P-201ENST00000582831 262 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 SPDYE12P-201ENST00000618416 771 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 AL590560.3-201ENST00000623350 461 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK2Q9NRA0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SPHK2Q9NRA0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPHK2Q9NRA0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SPHK2Q9NRA0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC004890.2-204ENST00000481968 304 ntBASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AL138828.2-201ENST00000615812 383 ntBASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AP001094.4-201ENST00000579008 2176 ntBASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 AL603756.1-201ENST00000606511 2163 ntBASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPHK2Q9NRA0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 MIR661-201ENST00000384842 89 ntBASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 FAM207CP-201ENST00000443486 507 ntBASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 HLA-V-204ENST00000476601 1289 ntBASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 TERF1P3-201ENST00000505638 1227 ntBASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.88■□□□□ 0.29
SPHK2Q9NRA0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms