Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.23■□□□□ 0.35
HPS4Q9NQG7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 AP001350.2-201ENST00000625104 1094 ntBASIC17.23■□□□□ 0.35
HPS4Q9NQG7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS4Q9NQG7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 AC236430.1-201ENST00000402231 743 ntBASIC17.22■□□□□ 0.35
HPS4Q9NQG7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 RN7SL204P-201ENST00000582831 262 ntBASIC17.22■□□□□ 0.35
HPS4Q9NQG7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 AL390754.1-201ENST00000619088 582 ntBASIC17.22■□□□□ 0.35
HPS4Q9NQG7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS4Q9NQG7 KRT8P49-201ENST00000604166 1432 ntBASIC17.21■□□□□ 0.35
HPS4Q9NQG7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 AC084018.2-201ENST00000613093 2607 ntBASIC17.21■□□□□ 0.35
HPS4Q9NQG7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 AL138688.1-201ENST00000624851 1594 ntBASIC17.21■□□□□ 0.35
HPS4Q9NQG7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 AC002472.2-201ENST00000442739 958 ntBASIC17.21■□□□□ 0.35
HPS4Q9NQG7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 TSPY16P-201ENST00000449843 468 ntBASIC17.21■□□□□ 0.35
HPS4Q9NQG7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HPS4Q9NQG7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms