Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 AC025580.3-201ENST00000617932 1424 ntBASIC14.26□□□□□ -0.13
GCM1Q9NP62 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 AC023274.1-201ENST00000418278 595 ntBASIC14.26□□□□□ -0.13
GCM1Q9NP62 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 KRT19P2-202ENST00000557173 1012 ntBASIC14.26□□□□□ -0.13
GCM1Q9NP62 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 MPDU1-223ENST00000582151 728 ntBASIC14.26□□□□□ -0.13
GCM1Q9NP62 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.26□□□□□ -0.13
GCM1Q9NP62 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GCM1Q9NP62 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 NORAD-201ENST00000565493 5339 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AC084018.2-201ENST00000613093 2607 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AC131009.4-201ENST00000624048 1740 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AC002347.1-201ENST00000569543 541 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 MIR4515-201ENST00000584082 81 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AL513190.1-201ENST00000621254 727 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AL645728.2-201ENST00000641974 660 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 AC092865.6-201ENST00000642101 219 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 SLC22A20-204ENST00000530038 1673 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 AC080080.1-201ENST00000625121 2420 ntBASIC14.25□□□□□ -0.13
GCM1Q9NP62 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GCM1Q9NP62 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GCM1Q9NP62 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GCM1Q9NP62 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GCM1Q9NP62 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms