Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 SPTLC1P5-201ENST00000450718 252 ntBASIC15.2■□□□□ 0.02
CHD8Q9HCK8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 MIR4741-201ENST00000579822 90 ntBASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AC244452.3-201ENST00000636814 210 ntBASIC15.2■□□□□ 0.02
CHD8Q9HCK8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 EEF1DP6-201ENST00000449232 372 ntBASIC15.2■□□□□ 0.02
CHD8Q9HCK8 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD8Q9HCK8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AC134312.5-201ENST00000568031 1313 ntBASIC15.19■□□□□ 0.02
CHD8Q9HCK8 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 AL139327.4-201ENST00000612362 153 ntBASIC15.19■□□□□ 0.02
CHD8Q9HCK8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD8Q9HCK8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 POM121L10P-201ENST00000436994 1285 ntBASIC15.18■□□□□ 0.02
CHD8Q9HCK8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CHD8Q9HCK8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms