Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 NUS1P2-201ENST00000417358 873 ntBASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHACTR1Q9C0D0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 ATP5G2P1-201ENST00000433580 426 ntBASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 HYMAI-201ENST00000635591 3347 ntBASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 AL353732.1-201ENST00000569618 1459 ntBASIC16.93■□□□□ 0.3
PHACTR1Q9C0D0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 NKAPP1-205ENST00000585790 367 ntBASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 AC004706.3-202ENST00000621574 984 ntBASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PHACTR1Q9C0D0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHACTR1Q9C0D0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms