Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MIR6805-201ENST00000615055 62 ntBASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 MIR6069-201ENST00000620069 79 ntBASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11XQ9BZA7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 ELK1P1-201ENST00000485699 580 ntBASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 KRT17P8-201ENST00000540749 863 ntBASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11XQ9BZA7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 AL645728.1-201ENST00000366221 2101 ntBASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 GGT4P-201ENST00000623672 1708 ntBASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 TTTY23B-201ENST00000442790 549 ntBASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 MYCLP2-201ENST00000449268 967 ntBASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 AL139010.1-201ENST00000454878 894 ntBASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11XQ9BZA7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AC123567.1-201ENST00000548294 1261 ntBASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 RAB43P1-201ENST00000561790 589 ntBASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AC092337.1-201ENST00000568699 1129 ntBASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11XQ9BZA7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms