Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC009053.2-201ENST00000563701 2365 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC006277.1-201ENST00000624348 1610 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC055876.3-201ENST00000431496 288 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TMPRSS11CP-201ENST00000453277 683 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC125807.1-201ENST00000483097 614 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 IGHV3-42-201ENST00000520410 361 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 ALG1L8P-201ENST00000533887 760 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 MIR4745-201ENST00000577608 62 ntBASIC5.64□□□□□ -1.51
KRTAP4-3Q9BYR4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms