Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 FRMD8P1-201ENST00000440433 1524 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AC027369.6-201ENST00000525520 931 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 RARRES2P9-201ENST00000565168 469 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 AL138918.1-201ENST00000568306 659 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 AC027307.3-201ENST00000594262 1100 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 AC012645.4-201ENST00000610691 1061 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 AC073592.8-201ENST00000624126 511 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AC139713.2-201ENST00000641328 2723 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AL138688.1-201ENST00000624851 1594 ntBASIC15.91■□□□□ 0.14
CMKLR1Q99788 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CMKLR1Q99788 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 AC003101.2-201ENST00000612557 442 ntBASIC15.9■□□□□ 0.14
CMKLR1Q99788 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.9■□□□□ 0.14
CMKLR1Q99788 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CMKLR1Q99788 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CMKLR1Q99788 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.89■□□□□ 0.13
CMKLR1Q99788 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 AC116353.5-201ENST00000638148 1699 ntBASIC15.89■□□□□ 0.13
CMKLR1Q99788 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CMKLR1Q99788 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.89■□□□□ 0.13
CMKLR1Q99788 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 MIR661-201ENST00000384842 89 ntBASIC15.89■□□□□ 0.13
CMKLR1Q99788 AC142381.1-201ENST00000426099 345 ntBASIC15.89■□□□□ 0.13
CMKLR1Q99788 AC092580.3-201ENST00000430932 139 ntBASIC15.89■□□□□ 0.13
CMKLR1Q99788 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.89■□□□□ 0.13
CMKLR1Q99788 AC005225.4-201ENST00000557330 545 ntBASIC15.89■□□□□ 0.13
CMKLR1Q99788 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMKLR1Q99788 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms