Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 AP001059.3-201ENST00000619053 235 ntBASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CDK5RAP1Q96SZ6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 AC015911.4-201ENST00000588022 1070 ntBASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 AL603756.1-201ENST00000606511 2163 ntBASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK5RAP1Q96SZ6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AC011270.2-201ENST00000624293 2550 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AL139400.1-201ENST00000366220 510 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 SPDYE7P-202ENST00000420373 878 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 FAM58DP-201ENST00000428076 619 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 RBPMS2P1-201ENST00000437762 623 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 CNN2P2-201ENST00000443536 909 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 CNN2P3-201ENST00000450201 906 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AC067863.1-201ENST00000494933 530 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 AL136317.3-201ENST00000618497 906 ntBASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CDK5RAP1Q96SZ6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms