Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 AC093525.9-201ENST00000624961 1746 ntBASIC12.68□□□□□ -0.38
AP1S3Q96PC3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.68□□□□□ -0.38
AP1S3Q96PC3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 AC024909.3-201ENST00000611513 2257 ntBASIC12.67□□□□□ -0.38
AP1S3Q96PC3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 MYCLP1-201ENST00000372451 1075 ntBASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 TSPY7P-201ENST00000431358 1114 ntBASIC12.67□□□□□ -0.38
AP1S3Q96PC3 KRT18P48-201ENST00000434763 852 ntBASIC12.67□□□□□ -0.38
AP1S3Q96PC3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 AC046185.3-201ENST00000623228 1824 ntBASIC12.67□□□□□ -0.38
AP1S3Q96PC3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP1S3Q96PC3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 KRT17P2-201ENST00000300992 1314 ntBASIC12.66□□□□□ -0.38
AP1S3Q96PC3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 Z99916.2-201ENST00000604037 246 ntBASIC12.66□□□□□ -0.38
AP1S3Q96PC3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP1S3Q96PC3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms