Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.26■□□□□ 0.19
PDLIM5Q96HC4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AC109635.5-201ENST00000533593 962 ntBASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AC010507.1-201ENST00000633895 436 ntBASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AC007064.4-201ENST00000637740 555 ntBASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AL596087.1-201ENST00000400979 1969 ntBASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AC006449.6-201ENST00000612330 2296 ntBASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PDLIM5Q96HC4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 AC034105.1-201ENST00000563488 319 ntBASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 OR6D1P-203ENST00000641209 4860 ntBASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.24■□□□□ 0.19
PDLIM5Q96HC4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms