Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TUBB7P-202ENST00000428444 1305 ntBASIC17.23■□□□□ 0.35
IFT43Q96FT9 TUBB8P7-204ENST00000567960 1332 ntBASIC17.23■□□□□ 0.35
IFT43Q96FT9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 RPSAP43-201ENST00000402237 625 ntBASIC17.23■□□□□ 0.35
IFT43Q96FT9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 GPX1P2-201ENST00000429271 606 ntBASIC17.23■□□□□ 0.35
IFT43Q96FT9 RPS15P9-201ENST00000494093 319 ntBASIC17.23■□□□□ 0.35
IFT43Q96FT9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.23■□□□□ 0.35
IFT43Q96FT9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT43Q96FT9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IFT43Q96FT9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 PCDHA14-201ENST00000506751 2298 ntBASIC17.22■□□□□ 0.35
IFT43Q96FT9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 MTDHP5-201ENST00000598980 586 ntBASIC17.22■□□□□ 0.35
IFT43Q96FT9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT43Q96FT9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT43Q96FT9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 AC092183.1-201ENST00000469884 875 ntBASIC17.21■□□□□ 0.35
IFT43Q96FT9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.21■□□□□ 0.35
IFT43Q96FT9 AC064836.3-201ENST00000607928 673 ntBASIC17.21■□□□□ 0.35
IFT43Q96FT9 GGTLC5P-201ENST00000617623 998 ntBASIC17.21■□□□□ 0.35
IFT43Q96FT9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT43Q96FT9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms