Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.66■□□□□ 0.26
SIPA1Q96FS4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 MIR661-201ENST00000384842 89 ntBASIC16.66■□□□□ 0.26
SIPA1Q96FS4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 AC008761.3-201ENST00000624803 892 ntBASIC16.66■□□□□ 0.26
SIPA1Q96FS4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIPA1Q96FS4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 HLA-H-201ENST00000383620 1096 ntBASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AC015922.1-201ENST00000421102 1152 ntBASIC16.65■□□□□ 0.26
SIPA1Q96FS4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AC007967.4-201ENST00000614700 386 ntBASIC16.65■□□□□ 0.26
SIPA1Q96FS4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AL671710.1-201ENST00000610245 2349 ntBASIC16.65■□□□□ 0.26
SIPA1Q96FS4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.65■□□□□ 0.26
SIPA1Q96FS4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SIPA1Q96FS4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SIPA1Q96FS4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms