Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCE1Q969G3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCE1Q969G3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 MIR3652-201ENST00000579335 131 ntBASIC18.83■□□□□ 0.6
SMARCE1Q969G3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMARCE1Q969G3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 SART3-203ENST00000546611 1184 ntBASIC18.82■□□□□ 0.6
SMARCE1Q969G3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 AL121772.3-201ENST00000610840 674 ntBASIC18.82■□□□□ 0.6
SMARCE1Q969G3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.82■□□□□ 0.6
SMARCE1Q969G3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.82■□□□□ 0.6
SMARCE1Q969G3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 SNX33P1-201ENST00000592116 1762 ntBASIC18.81■□□□□ 0.6
SMARCE1Q969G3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCE1Q969G3 KRT18P31-201ENST00000506277 1292 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms