Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRUNE2Q8WUY3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 FNTAP2-201ENST00000430308 634 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC098859.1-201ENST00000502915 1238 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC008687.7-202ENST00000637404 953 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC244669.2-201ENST00000612320 853 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 CU634019.7-201ENST00000624153 1185 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 FP236241.2-201ENST00000624906 1185 ntBASIC17.1■□□□□ 0.33
PRUNE2Q8WUY3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 TIMM17BP1-201ENST00000545713 516 ntBASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 AC133539.2-201ENST00000604757 467 ntBASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PRUNE2Q8WUY3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 AC087289.5-201ENST00000586076 3175 ntBASIC17.08■□□□□ 0.33
PRUNE2Q8WUY3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 CNN2P8-201ENST00000421872 913 ntBASIC17.08■□□□□ 0.32
PRUNE2Q8WUY3 AC061975.2-201ENST00000581722 295 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms