Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHKBP1Q8TBC3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 SPDYE7P-202ENST00000420373 878 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 TREML5P-201ENST00000421694 576 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 BASP1P1-201ENST00000430708 665 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 COX20P2-201ENST00000452636 358 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 INGX-202ENST00000489074 768 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 AC140878.1-201ENST00000565277 250 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 AC138761.1-201ENST00000584393 385 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 MIR6080-201ENST00000617359 66 ntBASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.39
SHKBP1Q8TBC3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SHKBP1Q8TBC3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.45■□□□□ 0.38
SHKBP1Q8TBC3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 LINC00895-201ENST00000629028 1637 ntBASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHKBP1Q8TBC3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms