Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 AC005237.2-201ENST00000434368 219 ntBASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 TIMM8BP1-201ENST00000452384 211 ntBASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 LINC02560-201ENST00000596379 459 ntBASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 AC026120.1-201ENST00000611536 926 ntBASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 AL139011.1-202ENST00000642063 584 ntBASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NKX2-3Q8TAU0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 FOXO1B-201ENST00000504678 1527 ntBASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AC002056.1-201ENST00000395613 760 ntBASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AL671277.1-201ENST00000429656 993 ntBASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AC069335.1-201ENST00000489972 472 ntBASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 LINC01225-203ENST00000563550 1244 ntBASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX2-3Q8TAU0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 AC092364.2-201ENST00000596710 2692 ntBASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 TUBB3P1-201ENST00000405796 1332 ntBASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 KLF2P3-201ENST00000451977 1087 ntBASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX2-3Q8TAU0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms