Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 AL355306.1-201ENST00000415580 579 ntBASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 ACTG1P14-201ENST00000446382 1122 ntBASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 YBX1P5-201ENST00000509441 847 ntBASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 AC010327.4-202ENST00000591484 748 ntBASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 AL118508.1-201ENST00000613502 2345 ntBASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ZIC4Q8N9L1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 AC092865.5-201ENST00000545435 363 ntBASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 RARRES2P8-201ENST00000566335 367 ntBASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 LINC01144-201ENST00000626198 1710 ntBASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ZIC4Q8N9L1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 AKAP8P1-201ENST00000434743 1349 ntBASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 ELL2P1-201ENST00000413990 1906 ntBASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 TFAMP1-201ENST00000412727 736 ntBASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 KRT18P34-201ENST00000488218 1270 ntBASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC4Q8N9L1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms