Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHPFQ8IZ52 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 FO538757.1-201ENST00000623083 1397 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 MIR346-201ENST00000362234 95 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 TREML5P-201ENST00000421694 576 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 COX20P2-201ENST00000452636 358 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AC138761.1-201ENST00000584393 385 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AL390754.1-201ENST00000619088 582 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 LINC02012-201ENST00000608206 1725 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 AD000864.1-201ENST00000624076 2295 ntBASIC16.93■□□□□ 0.3
CHPFQ8IZ52 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHPFQ8IZ52 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 AP001094.4-201ENST00000579008 2176 ntBASIC16.92■□□□□ 0.3
CHPFQ8IZ52 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 KRT18P34-201ENST00000488218 1270 ntBASIC16.92■□□□□ 0.3
CHPFQ8IZ52 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.92■□□□□ 0.3
CHPFQ8IZ52 AL138918.1-201ENST00000568306 659 ntBASIC16.92■□□□□ 0.3
CHPFQ8IZ52 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms