Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 AC073621.1-201ENST00000392730 636 ntBASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 SNX33P1-201ENST00000592116 1762 ntBASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 CYP2T1P-202ENST00000641596 2535 ntBASIC14.79□□□□□ -0.04
LINC00346Q8IVM7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 KRT18P27-201ENST00000427733 1299 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PMS2P1-201ENST00000431037 1228 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 FAM197Y8-203ENST00000450145 560 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 AC136632.2-201ENST00000512891 861 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 AL139011.1-202ENST00000642063 584 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 AL391005.1-201ENST00000623953 2435 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 AC131009.4-201ENST00000624048 1740 ntBASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00346Q8IVM7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LINC00346Q8IVM7 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms