Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AC005840.4-201ENST00000541242 2494 ntBASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CROCCP3Q8IVE0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 AC097376.2-205ENST00000610159 5334 ntBASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 MYCLP1-201ENST00000372451 1075 ntBASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 CCR12P-201ENST00000446203 998 ntBASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 SEC1P-202ENST00000473944 940 ntBASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 AC092865.7-201ENST00000641832 219 ntBASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 AL109954.1-202ENST00000564051 2148 ntBASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CROCCP3Q8IVE0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 KRT89P-201ENST00000620027 1478 ntBASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CROCCP3Q8IVE0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 PCDHA3-202ENST00000532566 4594 ntBASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.14■□□□□ 0.01
CROCCP3Q8IVE0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms