Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 AC079781.3-201ENST00000449110 356 ntBASIC15.43■□□□□ 0.06
VRK2Q86Y07 AF186996.4-201ENST00000467186 377 ntBASIC15.43■□□□□ 0.06
VRK2Q86Y07 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 IGHV3-65-201ENST00000523210 341 ntBASIC15.43■□□□□ 0.06
VRK2Q86Y07 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 AL691432.3-201ENST00000621860 400 ntBASIC15.43■□□□□ 0.06
VRK2Q86Y07 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK2Q86Y07 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK2Q86Y07 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AC008894.3-201ENST00000624324 3103 ntBASIC15.42■□□□□ 0.06
VRK2Q86Y07 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.42■□□□□ 0.06
VRK2Q86Y07 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 KRT18P67-201ENST00000432816 1264 ntBASIC15.42■□□□□ 0.06
VRK2Q86Y07 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK2Q86Y07 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 AC129492.6-201ENST00000611383 1305 ntBASIC15.42■□□□□ 0.06
VRK2Q86Y07 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK2Q86Y07 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK2Q86Y07 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.41■□□□□ 0.06
VRK2Q86Y07 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms