Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 AL592309.1-201ENST00000443127 649 ntBASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IGHV3-62-201ENST00000520057 340 ntBASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM4Q86VH4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 AC005237.2-201ENST00000434368 219 ntBASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 SPCS2P4-201ENST00000436160 681 ntBASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM4Q86VH4 AC106886.4-201ENST00000623557 2502 ntBASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LRRTM4Q86VH4 AL031731.1-201ENST00000642131 2094 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms