Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CACNA2D4Q7Z3S7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CACNA2D4Q7Z3S7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.35■□□□□ 0.53
CACNA2D4Q7Z3S7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CACNA2D4Q7Z3S7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CACNA2D4Q7Z3S7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.35■□□□□ 0.53
CACNA2D4Q7Z3S7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 KRT8P49-201ENST00000604166 1432 ntBASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 AL590787.1-201ENST00000568856 1315 ntBASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 ALOX12P2-203ENST00000570921 1945 ntBASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 AC073648.2-201ENST00000510116 352 ntBASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CACNA2D4Q7Z3S7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 NCF1C-201ENST00000438382 1427 ntBASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CACNA2D4Q7Z3S7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 PRYP5-201ENST00000451909 266 ntBASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 AL353135.1-201ENST00000606729 504 ntBASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CACNA2D4Q7Z3S7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 LINC02199-201ENST00000506655 2702 ntBASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 AC026691.1-201ENST00000602502 2017 ntBASIC18.32■□□□□ 0.52
CACNA2D4Q7Z3S7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms