Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 AL024508.2-201ENST00000607749 1894 ntBASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FOXR1Q6PIV2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MIR574-201ENST00000385209 96 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AL031284.1-201ENST00000419297 478 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 POM121L3P-201ENST00000419331 1163 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC008608.2-201ENST00000606089 416 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC139530.3-201ENST00000620344 690 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC148477.8-201ENST00000624298 468 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 AC023908.3-201ENST00000564211 3047 ntBASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXR1Q6PIV2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 OR6D1P-203ENST00000641209 4860 ntBASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 AC132008.2-207ENST00000454517 770 ntBASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 BNIP3P18-201ENST00000593976 575 ntBASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 AC117500.6-201ENST00000624871 588 ntBASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXR1Q6PIV2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms