Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 HLA-A-201ENST00000376802 1334 ntBASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 HCG4-201ENST00000418983 998 ntBASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 IGHV3-22-201ENST00000520721 359 ntBASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 UNC93B6-202ENST00000528242 690 ntBASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AP001005.1-201ENST00000571755 1248 ntBASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF549Q6P9A3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 IGLL3P-201ENST00000412472 434 ntBASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PRSS29P-201ENST00000440800 595 ntBASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 RNA5SP415-201ENST00000517246 115 ntBASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF549Q6P9A3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms