Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 CYP2T1P-202ENST00000641596 2535 ntBASIC17.05■□□□□ 0.32
CASC4Q6P4E1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 FGFR3P6-201ENST00000457012 610 ntBASIC17.05■□□□□ 0.32
CASC4Q6P4E1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 AC067930.6-201ENST00000623257 4947 ntBASIC17.05■□□□□ 0.32
CASC4Q6P4E1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CASC4Q6P4E1 PI4KAP1-204ENST00000612579 1703 ntBASIC17.04■□□□□ 0.32
CASC4Q6P4E1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TOP3BP1-201ENST00000420768 1380 ntBASIC17.04■□□□□ 0.32
CASC4Q6P4E1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TSPY26P-202ENST00000565928 3884 ntBASIC17.04■□□□□ 0.32
CASC4Q6P4E1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TSPY19P-201ENST00000418461 509 ntBASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TSPY18P-201ENST00000441642 509 ntBASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CASC4Q6P4E1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.03■□□□□ 0.32
CASC4Q6P4E1 AL391005.1-201ENST00000623953 2435 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms