Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SWSAP1Q6NVH7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SWSAP1Q6NVH7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.5■□□□□ 0.55
SWSAP1Q6NVH7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 AC008677.1-201ENST00000519230 1561 ntBASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 AC006538.1-201ENST00000567905 1585 ntBASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 AL031731.1-201ENST00000642131 2094 ntBASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SWSAP1Q6NVH7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 AC078925.2-201ENST00000624013 1973 ntBASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 AC022211.2-201ENST00000585075 2527 ntBASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 DUX4L27-201ENST00000554796 1261 ntBASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 AC015911.4-201ENST00000588022 1070 ntBASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 FOXO1B-201ENST00000504678 1527 ntBASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 TUBB3P1-201ENST00000405796 1332 ntBASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SWSAP1Q6NVH7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 MIR770-201ENST00000390219 98 ntBASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.47■□□□□ 0.55
SWSAP1Q6NVH7 CNN2P2-201ENST00000443536 909 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms