Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.92■□□□□ 0.62
PPP4R3AQ6IN85 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AL031731.1-201ENST00000642131 2094 ntBASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AC112191.1-201ENST00000523689 701 ntBASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 C20orf181-201ENST00000623918 480 ntBASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 GGT4P-201ENST00000623672 1708 ntBASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PPP4R3AQ6IN85 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 MKNK2P1-201ENST00000437526 628 ntBASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 DNAJB3-201ENST00000446806 729 ntBASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 AC091812.2-201ENST00000619081 385 ntBASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
PPP4R3AQ6IN85 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
PPP4R3AQ6IN85 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
PPP4R3AQ6IN85 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.89■□□□□ 0.62
PPP4R3AQ6IN85 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PPP4R3AQ6IN85 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PPP4R3AQ6IN85 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PPP4R3AQ6IN85 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PPP4R3AQ6IN85 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms