Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 LINC02199-201ENST00000506655 2702 ntBASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRAMEF9Q5VWM5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 PCGF3-213ENST00000620529 1899 ntBASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 AL031432.2-201ENST00000566714 459 ntBASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 AL928711.1-201ENST00000570165 459 ntBASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 BX640515.1-201ENST00000617215 977 ntBASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF9Q5VWM5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF9Q5VWM5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 AL645728.2-201ENST00000641974 660 ntBASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 PCDHA1-201ENST00000378133 2726 ntBASIC16.01■□□□□ 0.15
PRAMEF9Q5VWM5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16■□□□□ 0.15
PRAMEF9Q5VWM5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms