Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 RNU1-129P-201ENST00000384064 167 ntBASIC17.28■□□□□ 0.36
LRRC38Q5VT99 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 HMGA1P7-201ENST00000406908 502 ntBASIC17.28■□□□□ 0.36
LRRC38Q5VT99 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 AL160237.2-201ENST00000556165 472 ntBASIC17.28■□□□□ 0.36
LRRC38Q5VT99 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
LRRC38Q5VT99 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 AL031008.1-201ENST00000619963 541 ntBASIC17.28■□□□□ 0.36
LRRC38Q5VT99 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 REXO1L8P-201ENST00000604378 1897 ntBASIC17.28■□□□□ 0.36
LRRC38Q5VT99 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.28■□□□□ 0.36
LRRC38Q5VT99 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 PMS2P4-201ENST00000412466 1052 ntBASIC17.27■□□□□ 0.36
LRRC38Q5VT99 AL031284.1-201ENST00000419297 478 ntBASIC17.27■□□□□ 0.36
LRRC38Q5VT99 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 AC092910.1-201ENST00000482027 1129 ntBASIC17.27■□□□□ 0.36
LRRC38Q5VT99 AC108751.1-201ENST00000490852 363 ntBASIC17.27■□□□□ 0.36
LRRC38Q5VT99 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 MIR7706-201ENST00000613747 67 ntBASIC17.27■□□□□ 0.36
LRRC38Q5VT99 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 LINC02199-201ENST00000506655 2702 ntBASIC17.27■□□□□ 0.36
LRRC38Q5VT99 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LRRC38Q5VT99 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC38Q5VT99 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.27■□□□□ 0.35
LRRC38Q5VT99 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC38Q5VT99 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.27■□□□□ 0.35
LRRC38Q5VT99 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LRRC38Q5VT99 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AL603832.2-201ENST00000566195 2125 ntBASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AL450487.1-201ENST00000426799 995 ntBASIC17.26■□□□□ 0.35
LRRC38Q5VT99 VN2R19P-201ENST00000442399 1052 ntBASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AL031432.2-201ENST00000566714 459 ntBASIC17.26■□□□□ 0.35
LRRC38Q5VT99 AL928711.1-201ENST00000570165 459 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms