Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CDC42BPAQ5VT25 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 MIR8072-201ENST00000614241 80 ntBASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPAQ5VT25 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
CDC42BPAQ5VT25 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 PAM16-204ENST00000571941 674 ntTSL 3 BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPAQ5VT25 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 SUOX-214ENST00000551841 906 ntTSL 3 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 AP005482.1-201ENST00000563722 1273 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 RARRES2P5-201ENST00000564013 466 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 MIR5189-201ENST00000577370 114 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 AC015936.2-201ENST00000593177 259 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 COX11-210ENST00000639671 696 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 HLA-A-202ENST00000376806 1854 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 CROCCP4-201ENST00000457096 498 ntBASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 FADS2-205ENST00000517839 469 ntTSL 3 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 SPIB-207ENST00000597855 564 ntTSL 4 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPAQ5VT25 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPAQ5VT25 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms