Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNAPC4Q5SXM2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
SNAPC4Q5SXM2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC26.7■■□□□ 1.86
SNAPC4Q5SXM2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SNAPC4Q5SXM2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNAPC4Q5SXM2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 AC026954.1-201ENST00000429771 1293 ntBASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
SNAPC4Q5SXM2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 GNRHR2-203ENST00000581100 1187 ntBASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNAPC4Q5SXM2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 AL136982.4-201ENST00000437689 1740 ntBASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 PTP4A1P2-201ENST00000546033 454 ntBASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNAPC4Q5SXM2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNAPC4Q5SXM2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 INTS4P2-202ENST00000614726 2019 ntBASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 SLC25A24P2-201ENST00000415059 510 ntBASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 AL355864.2-201ENST00000447420 863 ntBASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 AC105129.2-201ENST00000559536 390 ntBASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms