Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AC097493.3-201ENST00000509725 367 ntBASIC17.59■□□□□ 0.41
VARS2Q5ST30 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VARS2Q5ST30 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VARS2Q5ST30 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VARS2Q5ST30 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.58■□□□□ 0.41
VARS2Q5ST30 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VARS2Q5ST30 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VARS2Q5ST30 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.58■□□□□ 0.41
VARS2Q5ST30 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 HLA-H-201ENST00000383620 1096 ntBASIC17.58■□□□□ 0.4
VARS2Q5ST30 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 EIF2S2P5-201ENST00000457635 968 ntBASIC17.58■□□□□ 0.4
VARS2Q5ST30 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 AC012645.4-201ENST00000610691 1061 ntBASIC17.58■□□□□ 0.4
VARS2Q5ST30 AC003101.2-201ENST00000612557 442 ntBASIC17.58■□□□□ 0.4
VARS2Q5ST30 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 AL512652.2-201ENST00000625156 1716 ntBASIC17.58■□□□□ 0.4
VARS2Q5ST30 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VARS2Q5ST30 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.58■□□□□ 0.4
VARS2Q5ST30 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 AC092580.3-201ENST00000430932 139 ntBASIC17.57■□□□□ 0.4
VARS2Q5ST30 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 SPTSSB-204ENST00000617024 1292 ntBASIC17.57■□□□□ 0.4
VARS2Q5ST30 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
VARS2Q5ST30 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VARS2Q5ST30 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.56■□□□□ 0.4
VARS2Q5ST30 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VARS2Q5ST30 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms