Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHROOM1Q2M3G4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 AL589739.1-201ENST00000607720 493 ntBASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHROOM1Q2M3G4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 AL353705.2-201ENST00000428243 662 ntBASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 SPDYE22P-201ENST00000582158 798 ntBASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.28■□□□□ 0.68
SHROOM1Q2M3G4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 AC105020.1-201ENST00000435356 2205 ntBASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SHROOM1Q2M3G4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SHROOM1Q2M3G4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SHROOM1Q2M3G4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SHROOM1Q2M3G4 GPAA1P2-202ENST00000606848 1787 ntBASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms