Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE3AQ05086 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBE3AQ05086 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBE3AQ05086 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE3AQ05086 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE3AQ05086 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE3AQ05086 RN7SL618P-201ENST00000477850 296 ntBASIC17.55■□□□□ 0.4
UBE3AQ05086 AC011495.1-201ENST00000498085 584 ntBASIC17.55■□□□□ 0.4
UBE3AQ05086 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE3AQ05086 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.55■□□□□ 0.4
UBE3AQ05086 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE3AQ05086 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE3AQ05086 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.55■□□□□ 0.4
UBE3AQ05086 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE3AQ05086 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.55■□□□□ 0.4
UBE3AQ05086 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBE3AQ05086 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.55■□□□□ 0.4
UBE3AQ05086 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE3AQ05086 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE3AQ05086 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBE3AQ05086 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
UBE3AQ05086 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE3AQ05086 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
UBE3AQ05086 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
UBE3AQ05086 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
UBE3AQ05086 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE3AQ05086 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.54■□□□□ 0.4
UBE3AQ05086 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.54■□□□□ 0.4
UBE3AQ05086 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE3AQ05086 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
UBE3AQ05086 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.54■□□□□ 0.4
UBE3AQ05086 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBE3AQ05086 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBE3AQ05086 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBE3AQ05086 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
UBE3AQ05086 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
UBE3AQ05086 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 LTB4R2-202ENST00000528054 3092 ntBASIC17.53■□□□□ 0.4
UBE3AQ05086 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE3AQ05086 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.53■□□□□ 0.4
UBE3AQ05086 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
UBE3AQ05086 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.53■□□□□ 0.4
UBE3AQ05086 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.53■□□□□ 0.4
UBE3AQ05086 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE3AQ05086 AC104794.3-201ENST00000566840 1248 ntBASIC17.53■□□□□ 0.4
UBE3AQ05086 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBE3AQ05086 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.53■□□□□ 0.4
UBE3AQ05086 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.53■□□□□ 0.4
UBE3AQ05086 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 AC006277.1-201ENST00000624348 1610 ntBASIC17.53■□□□□ 0.4
UBE3AQ05086 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
UBE3AQ05086 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBE3AQ05086 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.53■□□□□ 0.4
UBE3AQ05086 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms