Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.47□□□□□ -0.09
UBA52P62987 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.47□□□□□ -0.09
UBA52P62987 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.47□□□□□ -0.09
UBA52P62987 AC009533.2-201ENST00000543664 586 ntBASIC14.47□□□□□ -0.09
UBA52P62987 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.47□□□□□ -0.09
UBA52P62987 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.47□□□□□ -0.09
UBA52P62987 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.47□□□□□ -0.09
UBA52P62987 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.47□□□□□ -0.09
UBA52P62987 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.47□□□□□ -0.09
UBA52P62987 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.47□□□□□ -0.09
UBA52P62987 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
UBA52P62987 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBA52P62987 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 AC126177.1-201ENST00000547829 2218 ntBASIC14.46□□□□□ -0.09
UBA52P62987 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 AC009102.3-201ENST00000623118 1491 ntBASIC14.46□□□□□ -0.09
UBA52P62987 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 AC078925.2-201ENST00000624013 1973 ntBASIC14.46□□□□□ -0.09
UBA52P62987 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
UBA52P62987 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.46□□□□□ -0.09
UBA52P62987 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.46□□□□□ -0.09
UBA52P62987 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.46□□□□□ -0.09
UBA52P62987 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
UBA52P62987 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.46□□□□□ -0.09
UBA52P62987 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
UBA52P62987 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBA52P62987 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.46□□□□□ -0.09
UBA52P62987 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBA52P62987 DBET-201ENST00000630918 3363 ntBASIC14.46□□□□□ -0.1
UBA52P62987 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBA52P62987 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UBA52P62987 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBA52P62987 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.46□□□□□ -0.1
UBA52P62987 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 AC079328.2-201ENST00000561241 3354 ntBASIC14.45□□□□□ -0.1
UBA52P62987 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
UBA52P62987 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms