Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SNRPEP62304 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
SNRPEP62304 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.75□□□□□ -0.37
SNRPEP62304 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SNRPEP62304 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.75□□□□□ -0.37
SNRPEP62304 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC12.75□□□□□ -0.37
SNRPEP62304 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 AL121832.2-201ENST00000610979 668 ntBASIC12.75□□□□□ -0.37
SNRPEP62304 AC148477.4-201ENST00000613430 1793 ntBASIC12.75□□□□□ -0.37
SNRPEP62304 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC12.75□□□□□ -0.37
SNRPEP62304 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SNRPEP62304 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SNRPEP62304 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.75□□□□□ -0.37
SNRPEP62304 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.75□□□□□ -0.37
SNRPEP62304 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.74□□□□□ -0.37
SNRPEP62304 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 AL109659.2-201ENST00000606809 1674 ntBASIC12.74□□□□□ -0.37
SNRPEP62304 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 CICP16-201ENST00000502609 2813 ntBASIC12.74□□□□□ -0.37
SNRPEP62304 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SNRPEP62304 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.74□□□□□ -0.37
SNRPEP62304 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.74□□□□□ -0.37
SNRPEP62304 KRT16P3-201ENST00000439127 1283 ntBASIC12.74□□□□□ -0.37
SNRPEP62304 AC012414.1-201ENST00000556676 535 ntBASIC12.74□□□□□ -0.37
SNRPEP62304 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.74□□□□□ -0.37
SNRPEP62304 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SNRPEP62304 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SNRPEP62304 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.74□□□□□ -0.37
SNRPEP62304 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.74□□□□□ -0.37
SNRPEP62304 AL118506.1-201ENST00000601296 3082 ntBASIC12.74□□□□□ -0.37
SNRPEP62304 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.74□□□□□ -0.37
SNRPEP62304 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 AC097637.2-201ENST00000624096 1997 ntBASIC12.74□□□□□ -0.37
SNRPEP62304 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SNRPEP62304 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SNRPEP62304 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.74□□□□□ -0.37
SNRPEP62304 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.73□□□□□ -0.37
SNRPEP62304 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SNRPEP62304 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SNRPEP62304 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SNRPEP62304 FGD5P1-202ENST00000614866 2498 ntBASIC12.73□□□□□ -0.37
SNRPEP62304 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms