Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SPDYE8P-202ENST00000612377 668 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP1S1P61966 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.75■□□□□ 0.27
AP1S1P61966 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S1P61966 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 PCDHA12-202ENST00000613593 2588 ntBASIC16.75■□□□□ 0.27
AP1S1P61966 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S1P61966 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.74■□□□□ 0.27
AP1S1P61966 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.74■□□□□ 0.27
AP1S1P61966 AC134684.3-201ENST00000641758 218 ntBASIC16.74■□□□□ 0.27
AP1S1P61966 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP1S1P61966 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
AP1S1P61966 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
AP1S1P61966 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.74■□□□□ 0.27
AP1S1P61966 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.74■□□□□ 0.27
AP1S1P61966 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP1S1P61966 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
AP1S1P61966 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S1P61966 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
AP1S1P61966 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
AP1S1P61966 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
AP1S1P61966 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S1P61966 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP1S1P61966 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S1P61966 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S1P61966 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S1P61966 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 TIMM8BP1-201ENST00000452384 211 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S1P61966 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S1P61966 AP000344.2-201ENST00000512987 629 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.73■□□□□ 0.27
AP1S1P61966 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.73■□□□□ 0.27
AP1S1P61966 AC139530.3-201ENST00000620344 690 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 AC055717.3-201ENST00000622967 595 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 AL513210.1-201ENST00000629608 234 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 AC105339.1-204ENST00000636249 355 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 AC011676.5-201ENST00000624864 2660 ntBASIC16.73■□□□□ 0.27
AP1S1P61966 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
AP1S1P61966 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP1S1P61966 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.73■□□□□ 0.27
AP1S1P61966 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP1S1P61966 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.72■□□□□ 0.27
AP1S1P61966 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.72■□□□□ 0.27
AP1S1P61966 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP1S1P61966 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.72■□□□□ 0.27
AP1S1P61966 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms