Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CDC42P60953 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDC42P60953 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC42P60953 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 KRT18P38-201ENST00000449496 1282 ntBASIC15.3■□□□□ 0.04
CDC42P60953 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDC42P60953 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.3■□□□□ 0.04
CDC42P60953 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 AC090616.6-201ENST00000582640 721 ntBASIC15.3■□□□□ 0.04
CDC42P60953 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CDC42P60953 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDC42P60953 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.3■□□□□ 0.04
CDC42P60953 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.3■□□□□ 0.04
CDC42P60953 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.29■□□□□ 0.04
CDC42P60953 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 DBET-201ENST00000630918 3363 ntBASIC15.29■□□□□ 0.04
CDC42P60953 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CDC42P60953 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC42P60953 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 AC010491.1-201ENST00000563101 2797 ntBASIC15.29■□□□□ 0.04
CDC42P60953 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 AP002414.1-201ENST00000391405 1147 ntBASIC15.29■□□□□ 0.04
CDC42P60953 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.29■□□□□ 0.04
CDC42P60953 SIGLEC30P-201ENST00000455569 941 ntBASIC15.29■□□□□ 0.04
CDC42P60953 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC42P60953 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.29■□□□□ 0.04
CDC42P60953 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 IGHV3-41-201ENST00000613121 348 ntBASIC15.29■□□□□ 0.04
CDC42P60953 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.29■□□□□ 0.04
CDC42P60953 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDC42P60953 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDC42P60953 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
CDC42P60953 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.28■□□□□ 0.04
CDC42P60953 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDC42P60953 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CDC42P60953 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDC42P60953 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC42P60953 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC42P60953 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms