Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VSX2P58304 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VSX2P58304 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.96■□□□□ 0.14
VSX2P58304 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
VSX2P58304 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VSX2P58304 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VSX2P58304 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
VSX2P58304 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
VSX2P58304 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
VSX2P58304 AD000864.1-201ENST00000624076 2295 ntBASIC15.96■□□□□ 0.14
VSX2P58304 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VSX2P58304 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VSX2P58304 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 PMS2P4-201ENST00000412466 1052 ntBASIC15.95■□□□□ 0.14
VSX2P58304 AL671277.1-201ENST00000429656 993 ntBASIC15.95■□□□□ 0.14
VSX2P58304 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.95■□□□□ 0.14
VSX2P58304 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.95■□□□□ 0.14
VSX2P58304 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 AL161645.1-201ENST00000622716 1255 ntBASIC15.95■□□□□ 0.14
VSX2P58304 AC079781.4-201ENST00000641908 219 ntBASIC15.95■□□□□ 0.14
VSX2P58304 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VSX2P58304 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VSX2P58304 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.95■□□□□ 0.14
VSX2P58304 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
VSX2P58304 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VSX2P58304 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.94■□□□□ 0.14
VSX2P58304 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
VSX2P58304 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.94■□□□□ 0.14
VSX2P58304 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
VSX2P58304 AL355306.1-201ENST00000415580 579 ntBASIC15.94■□□□□ 0.14
VSX2P58304 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
VSX2P58304 AC092474.2-201ENST00000424288 719 ntBASIC15.94■□□□□ 0.14
VSX2P58304 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.94■□□□□ 0.14
VSX2P58304 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 DNAJB3-202ENST00000449667 1266 ntBASIC15.94■□□□□ 0.14
VSX2P58304 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.94■□□□□ 0.14
VSX2P58304 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.94■□□□□ 0.14
VSX2P58304 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
VSX2P58304 AC109635.5-201ENST00000533593 962 ntBASIC15.94■□□□□ 0.14
VSX2P58304 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.94■□□□□ 0.14
VSX2P58304 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
VSX2P58304 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.94■□□□□ 0.14
VSX2P58304 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.94■□□□□ 0.14
VSX2P58304 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
VSX2P58304 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
VSX2P58304 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.94■□□□□ 0.14
VSX2P58304 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VSX2P58304 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms